MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Rothia nasimurium
19428wA5_irhom_31
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 127
bases: 2,688,339 bps
CDS: 2,489
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,551
Total number of protein coding genes annotated/found:
2,489
Display
20
50
100
All items per page
🡄
Items 41 - 60
🡆
click arrow to navigate by page or
of 125 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5043|JADGLK010000011.1
SEQF5043_00083
Genome Viewer
NA
AA
507/169
20090-20596
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00085
Genome Viewer
NA
AA
1593/531
20996-22588
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00087
Genome Viewer
NA
AA
1008/336
23569-24576
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00089
Genome Viewer
NA
AA
534/178
25732-25199
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00092
Genome Viewer
NA
AA
417/139
29481-29065
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00093
Genome Viewer
NA
AA
555/185
30194-29640
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00094
Genome Viewer
NA
AA
240/80
30496-30257
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00098
Genome Viewer
NA
AA
1101/367
33695-34795
PhoH-like protein
SEQF5043|JADGLK010000011.1
SEQF5043_00100
Genome Viewer
NA
AA
1278/426
35310-36587
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00105
Genome Viewer
NA
AA
780/260
42106-42885
Trans%2Cpolycis-polyprenyl diphosphate synthase ((2Z%2C6E)-farnesyl diphosphate specific)
SEQF5043|JADGLK010000011.1
SEQF5043_00107
Genome Viewer
NA
AA
570/190
44691-44122
putative protein
SEQF5043|JADGLK010000011.1
SEQF5043_00109
Genome Viewer
NA
AA
357/119
46272-46628
Protein
SEQF5043|JADGLK010000011.1
SEQF5043_00112
Genome Viewer
NA
AA
402/134
49452-49853
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00118
Genome Viewer
NA
AA
384/128
56706-56323
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00119
Genome Viewer
NA
AA
459/153
56934-57392
hypothetical protein
SEQF5043|JADGLK010000011.1
SEQF5043_00120
Genome Viewer
NA
AA
1125/375
57423-58547
putative protein
SEQF5043|JADGLK010000011.1
SEQF5043_00122
Genome Viewer
NA
AA
735/245
59783-59049
Undecaprenyl-phosphate mannosyltransferase
SEQF5043|JADGLK010000011.1
SEQF5043_00123
Genome Viewer
NA
AA
1050/350
60948-59899
hypothetical protein
SEQF5043|JADGLK010000012.1
SEQF5043_00125
Genome Viewer
NA
AA
198/66
96-293
hypothetical protein
SEQF5043|JADGLK010000012.1
SEQF5043_00130
Genome Viewer
NA
AA
537/179
5997-5461
hypothetical protein
🡄
Items 41 - 60
🡆
click arrow to navigate by page or
of 125 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
